Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863121.1_cds_XP_016515557.1_27890
CDS Infomation

[gene=LOC107832250] [db_xref=GeneID:107832250] [protein=pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like] [protein_id=XP_016515557.1] [location=complement(10821..12686)] [gbkey=CDS]
Sequence

ATGGCTTGCCACATTACACTTTCTGTTACATCCTTAAATGTTAGTAGCAATGCCAATTCT
CAAGATCCTTCTGTGTCTCACAAACTCCAGACTTGCAACTCAACCAAAGAAATAAAAAAA
AACCAATCTTTAATCATTAAAATTAGCTCCGTACAGCACCCTCGACAACTCCTTTACACT
AAAATCATCTCTTTATGTTCTTCCCCAATACCCTCTAAGGAATTTAGCTATGTCCACTCT
CTTTTCAGTCAAATACAGGACATAGATATCAATCTTTTTAACTCCTTAATGAGATGTCTT
TTAAGTTCTAAGTGCAAAGAAAATGCTTTACTTGCATTACTAATGCATGTTGAAATGATG
TGTAAAGGCTTAGTTTTGGATAAATATACGTACCCTCTTGTTCTTAACGCATGTGTACAG
TTACGTGAGCTCAGACATGGCAGATTGGTTCATTCCCATGTGATAAAAACTGGGTTTGCG
TTGGATTTGTATGTGATGAACAATTTGATTCGTTTGTATGGTGTTTGTGGGTGCGTTGGG
AGTGTGAGGAAGGTGTTCGATAGAAGTCCTGAGAGAGATTTGGTATCTTGGACTACTTTG
ATTCAGGGGTATGTGGACAACGGGTATTTGAAGGAAGGAGTTGAGTTGTTCTTTGAAATG
ATTGAAGATGGATTAAGGGCTGACGAAAGGATGATGGTCGTTGTGATATCCTCTTGTGCT
AAATTAGAGGATCTGAGATTGGGCCAGAAGTTACACAAATATGTGCAGAGTCATAAGTTA
AATTTTGATGTGTTTATTGGGAATGCATTGATGGATATGTACTTAAAATGTGGTGAAACC
GATATTGCTCTTAATGTTTTCCGAGAGATGCCAACGAGAAATGTGATCTCTTGGAATACA
TTAATATCTGGATTGGCTCAGAGAAGGGAGTTTAAACAGGCCTTGAATGCATTTAATGAA
ATGCAGGATCAAGGAGTAAAGCCTGATAAGAATACTTTAGTTGGTGTTCTTAATTCCTGC
AGCAATTTAGGGGCACTAGAAGTTGGGAAATGGGTGCACACATATATAGACCGAAATCAG
ATACAAGTAGCAGGGTATGTTGGCAATGCGCTTGTAGATATGTATGCAAAATGTGGAAGC
ATGGACGACGCCCTTAGAGTTTTCGGAAGTATGAATTCTAAAGATGTTTATTCATACACA
TCTGTGATAGTTGGGTTGGCCACACATGGTAAGGCGCGGATAGCACTTAATTTCTTCTAT
AAGATGCTCGAAATTGGCATACAACCAAATGGGGTCACGTTCGTGGGTGTTCTCACAGCT
TGTAGTCATGGAGGATTGATTGAAGAGGGCCATAAGCTTTTTGCAGATATGTGGAGAGTG
CACAAATTAAAACCTCAAATAGAACACTATGGTTGCATGGTTGATCTGTTGAGTCGTGCA
GGGTTGACAGATGAAGCAGTAGAGTTCGTGAAAAACATGCCAATTGAACCTGATGCTTCT
ATTTGGGGATCAGTATTAGCAGCATGCAGGATCCAAGGAAGAGTTGAACTCGCTGAGCAT
GTGACTGAAAAACTTGTCAATATAGAGTCTGAAAAAGACGGTACATACATACTGATGTCA
AACACATATGCTTCAGTCAGTAAATGGAGAGACGCTTTAAAAGTAAGAAGGGCAATGAAG
AGACAGAAAATAAAGAAAGTTCCTGGATGTAGCTTAATTGAACTTGATGGTGTGGTTTCT
GAATTTAAGAAGGGTGACAAAGCGCATCCAAGAAGTAAAGACATATATGCGATGGTTGAG
CAACTGACACTTCATTCAATTGGTACAGAGACCTTCTCAAACGGAAGTGAGCCCCTCATA
GTTTGA

Peptide Sequence

PEP ID

XP_016515557.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Nicotiana tabacum]
Sequence

MACHITLSVTSLNVSSNANSQDPSVSHKLQTCNSTKEIKKNQSLIIKISSVQHPRQLLYT
KIISLCSSPIPSKEFSYVHSLFSQIQDIDINLFNSLMRCLLSSKCKENALLALLMHVEMM
CKGLVLDKYTYPLVLNACVQLRELRHGRLVHSHVIKTGFALDLYVMNNLIRLYGVCGCVG
SVRKVFDRSPERDLVSWTTLIQGYVDNGYLKEGVELFFEMIEDGLRADERMMVVVISSCA
KLEDLRLGQKLHKYVQSHKLNFDVFIGNALMDMYLKCGETDIALNVFREMPTRNVISWNT
LISGLAQRREFKQALNAFNEMQDQGVKPDKNTLVGVLNSCSNLGALEVGKWVHTYIDRNQ
IQVAGYVGNALVDMYAKCGSMDDALRVFGSMNSKDVYSYTSVIVGLATHGKARIALNFFY
KMLEIGIQPNGVTFVGVLTACSHGGLIEEGHKLFADMWRVHKLKPQIEHYGCMVDLLSRA
GLTDEAVEFVKNMPIEPDASIWGSVLAACRIQGRVELAEHVTEKLVNIESEKDGTYILMS
NTYASVSKWRDALKVRRAMKRQKIKKVPGCSLIELDGVVSEFKKGDKAHPRSKDIYAMVE
QLTLHSIGTETFSNGSEPLIV

Transcript Sequence

Gene sequence data has not been registered.